PCAtag RequirementsΒΆ
PCAtag Requirements
Java 1.8 or later version installed on your Java virtual machine
PCAtag software bundle
Download the PCAtag software bundle, this includes PCAtag.jar, fastPHASE and R which require to run PCAtag software.
Input data file
This input data file contains one header line with id, marker names(s) and optional subset column; and the remaining lines are for the genotype data - unique individual id, marker data and optinal subset name. Marker data should be entered as two separate columns of numbers separated by a space or tab. See 32snp.txt for detail.
Additional Requirement
Linux users must download and install R separately.